CvLTAELG1AAv7GMjp8RSaPGsvS8 SeView: An Efficient Sequence Format Converter CS619 Spring 2013 |
Sunday , 16 May 2021
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SeView: An Efficient Sequence Format Converter CS619 Spring 2013

This tool adopts divide and conquer approach to efficiently convert large (having minimum 10,000 sequences) multiple sequence alignments (MSA) to the selected format. Divide and conquer is implement by using multithreading technique of java programming language.

 


Help can be obtained from any existing tool like ReadSeq (http://www.ebi.ac.uk/Tools/sfc/readseq/help/).

 

SeView will also provide GUI to the command based MSA methods like ClustalOmega (http://www.clustal.org/omega/), MAFFT (http://mafft.cbrc.jp/alignment/software/), MUSCLE (http://www.ebi.ac.uk/Tools/msa/muscle/) etc.

 

Tools: Java, Netbeans

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